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Article: Comparative mRNA-seq analysis reveals the improved EPS production machinery in Streptococcus thermophilus ASCC 1275 during optimized milk fermentation

TitleComparative mRNA-seq analysis reveals the improved EPS production machinery in Streptococcus thermophilus ASCC 1275 during optimized milk fermentation
Authors
KeywordsExopolysaccharide
Milk fermentation
PH
Streptococcus thermophilus
Transcriptome
Issue Date2018
PublisherFrontiers Research Foundation.
Citation
Frontiers in Microbiology, Food Microbiology Section, 2018, v. 9 n. MAR, article no. 445 How to Cite?
AbstractExo-polysaccharide (EPS) produced by dairy starters plays critical roles in improving texture and functionalities of fermented dairy products. One of such high EPS producers, Streptococcus thermophilus ASCC 1275 (ST1275) was used as a model dairy strain to understand the stimulation of its EPS production under optimal milk fermentation conditions. The mRNA-seq analysis and targeted pathway analysis indicate that genes associated with lactose (milk sugar) catabolism, EPS assembly, proteolytic activity, and arginine/methionine/cysteine synthesis and transport in ST1275 were significantly up-regulated under the optimized conditions of pH 5.5, 40°C, or WPI supplementation compared to that of pH 6.5 and 37°C, respectively. This indicates that genes involved in above metabolisms cooperate together for improving EPS yield from ST1275. This study provides a global view map on potential targeted pathways and specific genes accounted for enhanced EPS production in Str. thermophilus and that could be modulated by fermentation conditions.
Persistent Identifierhttp://hdl.handle.net/10722/260857
ISSN
2021 Impact Factor: 6.064
2020 SCImago Journal Rankings: 1.701
ISI Accession Number ID

 

DC FieldValueLanguage
dc.contributor.authorWu, Q-
dc.contributor.authorShah, N-
dc.date.accessioned2018-09-14T08:48:35Z-
dc.date.available2018-09-14T08:48:35Z-
dc.date.issued2018-
dc.identifier.citationFrontiers in Microbiology, Food Microbiology Section, 2018, v. 9 n. MAR, article no. 445-
dc.identifier.issn1664-302X-
dc.identifier.urihttp://hdl.handle.net/10722/260857-
dc.description.abstractExo-polysaccharide (EPS) produced by dairy starters plays critical roles in improving texture and functionalities of fermented dairy products. One of such high EPS producers, Streptococcus thermophilus ASCC 1275 (ST1275) was used as a model dairy strain to understand the stimulation of its EPS production under optimal milk fermentation conditions. The mRNA-seq analysis and targeted pathway analysis indicate that genes associated with lactose (milk sugar) catabolism, EPS assembly, proteolytic activity, and arginine/methionine/cysteine synthesis and transport in ST1275 were significantly up-regulated under the optimized conditions of pH 5.5, 40°C, or WPI supplementation compared to that of pH 6.5 and 37°C, respectively. This indicates that genes involved in above metabolisms cooperate together for improving EPS yield from ST1275. This study provides a global view map on potential targeted pathways and specific genes accounted for enhanced EPS production in Str. thermophilus and that could be modulated by fermentation conditions.-
dc.languageeng-
dc.publisherFrontiers Research Foundation.-
dc.relation.ispartofFrontiers in Microbiology, Food Microbiology Section-
dc.rightsThis Document is Protected by copyright and was first published by Frontiers. All rights reserved. It is reproduced with permission.-
dc.rightsThis work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License.-
dc.subjectExopolysaccharide-
dc.subjectMilk fermentation-
dc.subjectPH-
dc.subjectStreptococcus thermophilus-
dc.subjectTranscriptome-
dc.titleComparative mRNA-seq analysis reveals the improved EPS production machinery in Streptococcus thermophilus ASCC 1275 during optimized milk fermentation-
dc.typeArticle-
dc.identifier.emailShah, N: npshah@hku.hk-
dc.identifier.authorityShah, N=rp01571-
dc.description.naturepublished_or_final_version-
dc.identifier.doi10.3389/fmicb.2018.00445-
dc.identifier.scopuseid_2-s2.0-85043529963-
dc.identifier.hkuros290726-
dc.identifier.volume9-
dc.identifier.issueMAR-
dc.identifier.spagearticle no. 445-
dc.identifier.epagearticle no. 445-
dc.identifier.isiWOS:000427266400002-
dc.publisher.placeSwitzerland-
dc.identifier.issnl1664-302X-

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