File Download
Links for fulltext
(May Require Subscription)
- Publisher Website: 10.1264/jsme2.ME10131
- Scopus: eid_2-s2.0-79952996497
- PMID: 21487198
- WOS: WOS:000288335700003
- Find via
Supplementary
- Citations:
- Appears in Collections:
Article: Seasonal dynamics of anammox bacteria in estuarial sediment of the mai po nature reserve revealed by analyzing the 16s rRNA and hydrazine oxidoreductase (hzo) genes
Title | Seasonal dynamics of anammox bacteria in estuarial sediment of the mai po nature reserve revealed by analyzing the 16s rRNA and hydrazine oxidoreductase (hzo) genes | ||||||||
---|---|---|---|---|---|---|---|---|---|
Authors | |||||||||
Keywords | 16S rRNA Anammox bacteria Estuary Hzo Mai po nature reserve Seasonal dynamics | ||||||||
Issue Date | 2011 | ||||||||
Publisher | Nihon Biseibutsu Seitai Gakkai. The Journal's web site is located at http://www.jstage.jst.go.jp/browse/jsme2/_vols/-char/en | ||||||||
Citation | Microbes And Environments, 2011, v. 26 n. 1, p. 15-22 How to Cite? | ||||||||
Abstract | The community and population dynamics of anammox bacteria in summer (wet) and winter (dry) seasons in estuar-ial mudflat sediment of the Mai Po Nature Reserve were investigated by 16S rRNA and hydrazine oxidoreductase (hzo) genes. 16S rRNA phylogenetic diversity showed that sequences related to 'Kuenenia' anammox bacteria were presented in summer but not winter while 'Scalindua' anammox bacteria occurred in both seasons and could be divided into six different clusters. Compared to the 16S rRNA genes, the hzo genes revealed a relatively uniform seasonal diversity, with sequences relating to 'Scalindua', 'Anammoxoglobus', and planctomycete KSU-1 found in both seasons. The seasonal specific bacterial groups and diversity based on the 16S rRNA and hzo genes indicated strong seasonal community structures in estuary sediment of this site. Furthermore, the higher abundance of hzo genes in summer than winter indicates clear seasonal population dynamics. Combining the physicochemical characteristics of estuary sediment in the two seasons and their correlations with anammox bacteria community structure, we proposed the strong seasonal dynamics in estuary sediment of Mai Po to be due to the anthropogenic and terrestrial inputs, especially in summer, which brings in freshwater anammox bacteria, such as 'Kuenenia', interacting with the coastal marine anammox bacteria 'Scalindua'. | ||||||||
Persistent Identifier | http://hdl.handle.net/10722/140908 | ||||||||
ISSN | 2023 Impact Factor: 2.1 2023 SCImago Journal Rankings: 0.646 | ||||||||
ISI Accession Number ID |
Funding Information: This research was supported in part by grants from the Agriculture, Fisheries and Conservation Department of The Hong Kong SAR Government (J-DG), a PhD studentship (ML) and the National Natural Science Foundation of China (3080032), Guangdong Province Natural Science Foundation 450 (84510301001692) (Y-GH). We would like to thank Jessie Lai and Dr. Zhen-Ye Zhao for laboratory assistance, technical support and chemical analyses during this investigation at The University of Hong Kong. | ||||||||
References |
DC Field | Value | Language |
---|---|---|
dc.contributor.author | Li, M | en_HK |
dc.contributor.author | Cao, H | en_HK |
dc.contributor.author | Hong, YG | en_HK |
dc.contributor.author | Gu, JD | en_HK |
dc.date.accessioned | 2011-09-23T06:21:18Z | - |
dc.date.available | 2011-09-23T06:21:18Z | - |
dc.date.issued | 2011 | en_HK |
dc.identifier.citation | Microbes And Environments, 2011, v. 26 n. 1, p. 15-22 | en_HK |
dc.identifier.issn | 1342-6311 | en_HK |
dc.identifier.uri | http://hdl.handle.net/10722/140908 | - |
dc.description.abstract | The community and population dynamics of anammox bacteria in summer (wet) and winter (dry) seasons in estuar-ial mudflat sediment of the Mai Po Nature Reserve were investigated by 16S rRNA and hydrazine oxidoreductase (hzo) genes. 16S rRNA phylogenetic diversity showed that sequences related to 'Kuenenia' anammox bacteria were presented in summer but not winter while 'Scalindua' anammox bacteria occurred in both seasons and could be divided into six different clusters. Compared to the 16S rRNA genes, the hzo genes revealed a relatively uniform seasonal diversity, with sequences relating to 'Scalindua', 'Anammoxoglobus', and planctomycete KSU-1 found in both seasons. The seasonal specific bacterial groups and diversity based on the 16S rRNA and hzo genes indicated strong seasonal community structures in estuary sediment of this site. Furthermore, the higher abundance of hzo genes in summer than winter indicates clear seasonal population dynamics. Combining the physicochemical characteristics of estuary sediment in the two seasons and their correlations with anammox bacteria community structure, we proposed the strong seasonal dynamics in estuary sediment of Mai Po to be due to the anthropogenic and terrestrial inputs, especially in summer, which brings in freshwater anammox bacteria, such as 'Kuenenia', interacting with the coastal marine anammox bacteria 'Scalindua'. | en_HK |
dc.language | eng | en_US |
dc.publisher | Nihon Biseibutsu Seitai Gakkai. The Journal's web site is located at http://www.jstage.jst.go.jp/browse/jsme2/_vols/-char/en | en_HK |
dc.relation.ispartof | Microbes and Environments | en_HK |
dc.subject | 16S rRNA | en_HK |
dc.subject | Anammox bacteria | en_HK |
dc.subject | Estuary | en_HK |
dc.subject | Hzo | en_HK |
dc.subject | Mai po nature reserve | en_HK |
dc.subject | Seasonal dynamics | en_HK |
dc.subject.mesh | Bacteria - classification - genetics - isolation and purification - metabolism | - |
dc.subject.mesh | Bacterial Proteins - genetics - metabolism | - |
dc.subject.mesh | Hydrazines - metabolism | - |
dc.subject.mesh | Oxidoreductases - genetics - metabolism | - |
dc.subject.mesh | RNA, Ribosomal, 16S - genetics | - |
dc.title | Seasonal dynamics of anammox bacteria in estuarial sediment of the mai po nature reserve revealed by analyzing the 16s rRNA and hydrazine oxidoreductase (hzo) genes | en_HK |
dc.type | Article | en_HK |
dc.identifier.email | Gu, JD: jdgu@hkucc.hku.hk | en_HK |
dc.identifier.authority | Gu, JD=rp00701 | en_HK |
dc.description.nature | link_to_OA_fulltext | - |
dc.identifier.doi | 10.1264/jsme2.ME10131 | en_HK |
dc.identifier.pmid | 21487198 | - |
dc.identifier.scopus | eid_2-s2.0-79952996497 | en_HK |
dc.identifier.hkuros | 194842 | en_US |
dc.relation.references | http://www.scopus.com/mlt/select.url?eid=2-s2.0-79952996497&selection=ref&src=s&origin=recordpage | en_HK |
dc.identifier.volume | 26 | en_HK |
dc.identifier.issue | 1 | en_HK |
dc.identifier.spage | 15 | en_HK |
dc.identifier.epage | 22 | en_HK |
dc.identifier.isi | WOS:000288335700003 | - |
dc.publisher.place | Japan | en_HK |
dc.identifier.scopusauthorid | Li, M=35210975800 | en_HK |
dc.identifier.scopusauthorid | Cao, H=37018049400 | en_HK |
dc.identifier.scopusauthorid | Hong, YG=7403393244 | en_HK |
dc.identifier.scopusauthorid | Gu, JD=7403129601 | en_HK |
dc.identifier.issnl | 1342-6311 | - |