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- Publisher Website: 10.1016/j.syapm.2005.01.003
- Scopus: eid_2-s2.0-19444385177
- PMID: 15997704
- WOS: WOS:000230346200005
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Article: Alkanindiges hongkongensis sp. nov. A novel Alkanindiges species isolated from a patient with parotid abscess
Title | Alkanindiges hongkongensis sp. nov. A novel Alkanindiges species isolated from a patient with parotid abscess |
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Authors | |
Keywords | Alkanindiges hongkongensis Parotid abscess Patient |
Issue Date | 2005 |
Publisher | Urban und Fischer Verlag. The Journal's web site is located at http://www.elsevier.com/locate/sam |
Citation | Systematic And Applied Microbiology, 2005, v. 28 n. 4, p. 316-322 How to Cite? |
Abstract | A bacterium was isolated from the abscess pus of a 72-year-old patient with Warthin's tumor and parotid abscess. The cells were aerobic, non-motile, Gram-negative but difficult to be destained, non-sporulating, coccobacillus. The bacterium grew poorly on sheep blood agar and MacConkey agar as non-hemolytic colonies of 0.5 mm in diameter after 24 h of incubation at 37°C in ambient air. Growth was enhanced by Tween 80. It produces catalase but not cytochrome oxidase. Sequencing of the cloned 16S rRNA PCR products of the bacterium revealed three different 16S rRNA gene sequences, with 12-31 bp differences among them. Phylogenetic analysis showed that the bacterium is closely related to Alkanindiges illinoisensis, with 5.0-5.9% differences between the 16S rRNA gene sequence of the bacterium and that of A. illinoisensis. Tryptophan auxotrophic strain of Acinetobacter trpE27 transformed with DNA extracted from the bacterium was unable to grow on tryptophan deficient medium, indicating that the bacterium was not a strain of Acinetobacter. The G+C content of the bacterium (mean±SD) was 46.9±4.3%. A new species, Alkanindiges hongkongensis sp. nov., is proposed, for which HKU9T is the type strain. Isolates with "small colonies" that are apparently Acinetobacter-like species should be carefully identified. Growth enhancement with aliphatic hydrocarbons should be looked for and 16S rRNA gene sequencing performed in order to find more potential cases of Alkanindiges infections, as well as to define the epidemiology, clinical spectrum, and outcome of infections associated with this genus. © 2005 Elsevier GmbH. All rights reserved. |
Persistent Identifier | http://hdl.handle.net/10722/157406 |
ISSN | 2023 Impact Factor: 3.3 2023 SCImago Journal Rankings: 0.872 |
ISI Accession Number ID | |
References |
DC Field | Value | Language |
---|---|---|
dc.contributor.author | Woo, PCY | en_US |
dc.contributor.author | Tse, H | en_US |
dc.contributor.author | Lau, SKP | en_US |
dc.contributor.author | Leung, KW | en_US |
dc.contributor.author | Woo, GKS | en_US |
dc.contributor.author | Wong, MKM | en_US |
dc.contributor.author | Ho, CM | en_US |
dc.contributor.author | Yuen, KY | en_US |
dc.date.accessioned | 2012-08-08T08:49:41Z | - |
dc.date.available | 2012-08-08T08:49:41Z | - |
dc.date.issued | 2005 | en_US |
dc.identifier.citation | Systematic And Applied Microbiology, 2005, v. 28 n. 4, p. 316-322 | en_US |
dc.identifier.issn | 0723-2020 | en_US |
dc.identifier.uri | http://hdl.handle.net/10722/157406 | - |
dc.description.abstract | A bacterium was isolated from the abscess pus of a 72-year-old patient with Warthin's tumor and parotid abscess. The cells were aerobic, non-motile, Gram-negative but difficult to be destained, non-sporulating, coccobacillus. The bacterium grew poorly on sheep blood agar and MacConkey agar as non-hemolytic colonies of 0.5 mm in diameter after 24 h of incubation at 37°C in ambient air. Growth was enhanced by Tween 80. It produces catalase but not cytochrome oxidase. Sequencing of the cloned 16S rRNA PCR products of the bacterium revealed three different 16S rRNA gene sequences, with 12-31 bp differences among them. Phylogenetic analysis showed that the bacterium is closely related to Alkanindiges illinoisensis, with 5.0-5.9% differences between the 16S rRNA gene sequence of the bacterium and that of A. illinoisensis. Tryptophan auxotrophic strain of Acinetobacter trpE27 transformed with DNA extracted from the bacterium was unable to grow on tryptophan deficient medium, indicating that the bacterium was not a strain of Acinetobacter. The G+C content of the bacterium (mean±SD) was 46.9±4.3%. A new species, Alkanindiges hongkongensis sp. nov., is proposed, for which HKU9T is the type strain. Isolates with "small colonies" that are apparently Acinetobacter-like species should be carefully identified. Growth enhancement with aliphatic hydrocarbons should be looked for and 16S rRNA gene sequencing performed in order to find more potential cases of Alkanindiges infections, as well as to define the epidemiology, clinical spectrum, and outcome of infections associated with this genus. © 2005 Elsevier GmbH. All rights reserved. | en_US |
dc.language | eng | en_US |
dc.publisher | Urban und Fischer Verlag. The Journal's web site is located at http://www.elsevier.com/locate/sam | en_US |
dc.relation.ispartof | Systematic and Applied Microbiology | en_US |
dc.subject | Alkanindiges hongkongensis | - |
dc.subject | Parotid abscess | - |
dc.subject | Patient | - |
dc.subject.mesh | Abscess - Microbiology | en_US |
dc.subject.mesh | Acinetobacter - Genetics | en_US |
dc.subject.mesh | Adenolymphoma - Complications - Microbiology | en_US |
dc.subject.mesh | Aerobiosis | en_US |
dc.subject.mesh | Aged | en_US |
dc.subject.mesh | Base Composition | en_US |
dc.subject.mesh | Dna, Bacterial - Chemistry - Isolation & Purification | en_US |
dc.subject.mesh | Dna, Ribosomal - Chemistry - Isolation & Purification | en_US |
dc.subject.mesh | Genes, Rrna | en_US |
dc.subject.mesh | Hong Kong | en_US |
dc.subject.mesh | Humans | en_US |
dc.subject.mesh | Male | en_US |
dc.subject.mesh | Molecular Sequence Data | en_US |
dc.subject.mesh | Moraxellaceae - Classification - Cytology - Isolation & Purification - Physiology | en_US |
dc.subject.mesh | Moraxellaceae Infections - Complications - Microbiology | en_US |
dc.subject.mesh | Parotid Diseases - Microbiology | en_US |
dc.subject.mesh | Parotid Gland - Microbiology | en_US |
dc.subject.mesh | Parotid Neoplasms - Complications - Microbiology | en_US |
dc.subject.mesh | Phylogeny | en_US |
dc.subject.mesh | Rna, Ribosomal, 16S - Genetics | en_US |
dc.subject.mesh | Transformation, Bacterial | en_US |
dc.title | Alkanindiges hongkongensis sp. nov. A novel Alkanindiges species isolated from a patient with parotid abscess | en_US |
dc.type | Article | en_US |
dc.identifier.email | Woo, PCY:pcywoo@hkucc.hku.hk | en_US |
dc.identifier.email | Tse, H:herman@graduate.hku.hk | en_US |
dc.identifier.email | Lau, SKP:skplau@hkucc.hku.hk | en_US |
dc.identifier.email | Yuen, KY:kyyuen@hkucc.hku.hk | en_US |
dc.identifier.authority | Woo, PCY=rp00430 | en_US |
dc.identifier.authority | Tse, H=rp00519 | en_US |
dc.identifier.authority | Lau, SKP=rp00486 | en_US |
dc.identifier.authority | Yuen, KY=rp00366 | en_US |
dc.description.nature | link_to_subscribed_fulltext | en_US |
dc.identifier.doi | 10.1016/j.syapm.2005.01.003 | en_US |
dc.identifier.pmid | 15997704 | - |
dc.identifier.scopus | eid_2-s2.0-19444385177 | en_US |
dc.identifier.hkuros | 114673 | - |
dc.relation.references | http://www.scopus.com/mlt/select.url?eid=2-s2.0-19444385177&selection=ref&src=s&origin=recordpage | en_US |
dc.identifier.volume | 28 | en_US |
dc.identifier.issue | 4 | en_US |
dc.identifier.spage | 316 | en_US |
dc.identifier.epage | 322 | en_US |
dc.identifier.isi | WOS:000230346200005 | - |
dc.publisher.place | Germany | en_US |
dc.identifier.scopusauthorid | Woo, PCY=7201801340 | en_US |
dc.identifier.scopusauthorid | Tse, H=7006070596 | en_US |
dc.identifier.scopusauthorid | Lau, SKP=7401596211 | en_US |
dc.identifier.scopusauthorid | Leung, KW=7401860831 | en_US |
dc.identifier.scopusauthorid | Woo, GKS=7006485416 | en_US |
dc.identifier.scopusauthorid | Wong, MKM=35123119500 | en_US |
dc.identifier.scopusauthorid | Ho, CM=7404652540 | en_US |
dc.identifier.scopusauthorid | Yuen, KY=36078079100 | en_US |
dc.identifier.issnl | 0723-2020 | - |