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Article: Copper-mediated peptide radical ions in the gas phase
Title | Copper-mediated peptide radical ions in the gas phase |
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Authors | |
Issue Date | 2004 |
Publisher | American Chemical Society. The Journal's web site is located at http://pubs.acs.org/journal/jpcbfk |
Citation | Journal Of Physical Chemistry B, 2004, v. 108 n. 30, p. 11170-11181 How to Cite? |
Abstract | Molecular radical cations, M ̇+, of amino acids and oligopeptides are produced by collision-induced dissociation of mixed complex ions, [Cu II(dien)M] ̇2+, that contain Cu II, an amine, typically diethylenetriamine (dien), and the oligopeptide, M. With dien as the amine ligand, abundant M ̇+ formation is observed only for the amino acids tryptophan and tyrosine, and oligopeptides that contain either the tryptophanyl or tyrosyl residue. Dissociation of the M ̇+ ion is rich and differs considerably from that of protonated amino acids and peptides. Facile fragmentation occurs around the α-carbon of the tryptophanyl residue. Cleavage of the N-C α bond and proton transfer from the exocyclic methylene group in the side chain to the N-terminal residue results in formation of the [z n -H] ̇+ ion and elimination of the N-terminal fragment as ammonia or an amide, depending on the position of the tryptophanyl residue. Cleavage of the C α - C bond of an oligopeptide containing a C-terminal tryptophan residue and proton transfer from the carboxylic group to the N-terminal fragment (a carbonyl oxygen atom) results in formation of the [a n + H] dot;+ ion and elimination of carbon dioxide. Both types of fragmentation have no analogous reactions in protonated peptides. For the M ̇+ of tryptophanylgly-cylglycine, WGG, elimination of the tryptophanyl side chain results in GGG ̇+. This radical cation fragments by eliminating its C-terminal glycine to give the [b 2 - H] ̇+ ion, which is an oxazolone and shares much of the structure and reactivity of the b 2 + ion from protonated triglycine. Density functional theory shows the mechanism of forming the [b 2 - H] ̇+ ion is similar to that of the b 2 + ion, although the free-energy barrier at 29.4 kcal/mol is lower. The [b 2 - H] ̇+ ion eliminates CO readily to give the [a 2 - H] ̇+ ion, which is an iminium radical ion. |
Persistent Identifier | http://hdl.handle.net/10722/168281 |
ISSN | 2023 Impact Factor: 2.8 2023 SCImago Journal Rankings: 0.760 |
ISI Accession Number ID | |
References |
DC Field | Value | Language |
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dc.contributor.author | BagheriMajdi, E | en_US |
dc.contributor.author | Ke, Y | en_US |
dc.contributor.author | Orlova, G | en_US |
dc.contributor.author | Chu, IK | en_US |
dc.contributor.author | Hopkinson, AC | en_US |
dc.contributor.author | Siu, KWM | en_US |
dc.date.accessioned | 2012-10-08T03:17:00Z | - |
dc.date.available | 2012-10-08T03:17:00Z | - |
dc.date.issued | 2004 | en_US |
dc.identifier.citation | Journal Of Physical Chemistry B, 2004, v. 108 n. 30, p. 11170-11181 | en_US |
dc.identifier.issn | 1520-6106 | en_US |
dc.identifier.uri | http://hdl.handle.net/10722/168281 | - |
dc.description.abstract | Molecular radical cations, M ̇+, of amino acids and oligopeptides are produced by collision-induced dissociation of mixed complex ions, [Cu II(dien)M] ̇2+, that contain Cu II, an amine, typically diethylenetriamine (dien), and the oligopeptide, M. With dien as the amine ligand, abundant M ̇+ formation is observed only for the amino acids tryptophan and tyrosine, and oligopeptides that contain either the tryptophanyl or tyrosyl residue. Dissociation of the M ̇+ ion is rich and differs considerably from that of protonated amino acids and peptides. Facile fragmentation occurs around the α-carbon of the tryptophanyl residue. Cleavage of the N-C α bond and proton transfer from the exocyclic methylene group in the side chain to the N-terminal residue results in formation of the [z n -H] ̇+ ion and elimination of the N-terminal fragment as ammonia or an amide, depending on the position of the tryptophanyl residue. Cleavage of the C α - C bond of an oligopeptide containing a C-terminal tryptophan residue and proton transfer from the carboxylic group to the N-terminal fragment (a carbonyl oxygen atom) results in formation of the [a n + H] dot;+ ion and elimination of carbon dioxide. Both types of fragmentation have no analogous reactions in protonated peptides. For the M ̇+ of tryptophanylgly-cylglycine, WGG, elimination of the tryptophanyl side chain results in GGG ̇+. This radical cation fragments by eliminating its C-terminal glycine to give the [b 2 - H] ̇+ ion, which is an oxazolone and shares much of the structure and reactivity of the b 2 + ion from protonated triglycine. Density functional theory shows the mechanism of forming the [b 2 - H] ̇+ ion is similar to that of the b 2 + ion, although the free-energy barrier at 29.4 kcal/mol is lower. The [b 2 - H] ̇+ ion eliminates CO readily to give the [a 2 - H] ̇+ ion, which is an iminium radical ion. | en_US |
dc.language | eng | en_US |
dc.publisher | American Chemical Society. The Journal's web site is located at http://pubs.acs.org/journal/jpcbfk | en_US |
dc.relation.ispartof | Journal of Physical Chemistry B | en_US |
dc.title | Copper-mediated peptide radical ions in the gas phase | en_US |
dc.type | Article | en_US |
dc.identifier.email | Chu, IK:ivankchu@hku.hk | en_US |
dc.identifier.authority | Chu, IK=rp00683 | en_US |
dc.description.nature | link_to_subscribed_fulltext | en_US |
dc.identifier.doi | 10.1021/jp049531q | en_US |
dc.identifier.scopus | eid_2-s2.0-4043152965 | en_US |
dc.relation.references | http://www.scopus.com/mlt/select.url?eid=2-s2.0-4043152965&selection=ref&src=s&origin=recordpage | en_US |
dc.identifier.volume | 108 | en_US |
dc.identifier.issue | 30 | en_US |
dc.identifier.spage | 11170 | en_US |
dc.identifier.epage | 11181 | en_US |
dc.identifier.isi | WOS:000222864200076 | - |
dc.publisher.place | United States | en_US |
dc.identifier.scopusauthorid | BagheriMajdi, E=6505978569 | en_US |
dc.identifier.scopusauthorid | Ke, Y=7102816491 | en_US |
dc.identifier.scopusauthorid | Orlova, G=7007153895 | en_US |
dc.identifier.scopusauthorid | Chu, IK=7103327484 | en_US |
dc.identifier.scopusauthorid | Hopkinson, AC=15067169300 | en_US |
dc.identifier.scopusauthorid | Siu, KWM=35312218500 | en_US |
dc.identifier.issnl | 1520-5207 | - |