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- Publisher Website: 10.1007/s10532-005-9018-6
- Scopus: eid_2-s2.0-33748657366
- PMID: 16477356
- WOS: WOS:000240395700008
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Article: Cloning of the organophosphorus pesticide hydrolase gene clusters of seven degradative bacteria isolated from a methyl parathion contaminated site and evidence of their horizontal gene transfer
Title | Cloning of the organophosphorus pesticide hydrolase gene clusters of seven degradative bacteria isolated from a methyl parathion contaminated site and evidence of their horizontal gene transfer |
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Authors | |
Keywords | Degradation Horizontal gene transfer Organophosphorus hydrolase gene cluster Signal peptide |
Issue Date | 2006 |
Publisher | Springer Verlag Dordrecht. The Journal's web site is located at http://springerlink.metapress.com/openurl.asp?genre=journal&issn=0923-9820 |
Citation | Biodegradation, 2006, v. 17 n. 5, p. 465-472 How to Cite? |
Abstract | Seven organophosphorus pesticide-degrading bacteria harboring the methyl parathion degrading (mpd) gene were isolated from a methyl parathion contaminated site. In this study, the 4.7 kb mpd gene cluster, conserved in all seven bacteria capable of degrading methyl parathion, was cloned and further analysis revealed that this cluster contained five ORFs and the mpd gene was associated with a mobile element, IS6100. In addition to mpd gene ORF and tnpA ORF, three other ORFs showed high homology to the permease component of ABC-type transport system, the general secretion pathway protein B, and the RNA polymerase sigma 70 factor, respectively. The mpd genes of these 7 strains were subcloned and expressed in E. coli, SDS-PAGE and zymogram analysis showed that two expression products of mpd genes in E. coli were found, but the one without signal peptide showed the hydrolytic activities. Our evidences collectively suggest that mpd gene cluster may be disseminated through horizontal gene transfer based on phylogenetic analysis of the cluster and their host bacterial strains, and comparisons of GC content of the cluster and respective host's chromosome. © Springer 2006. |
Persistent Identifier | http://hdl.handle.net/10722/178955 |
ISSN | 2023 Impact Factor: 3.1 2023 SCImago Journal Rankings: 0.840 |
ISI Accession Number ID | |
References |
DC Field | Value | Language |
---|---|---|
dc.contributor.author | Zhang, R | en_US |
dc.contributor.author | Cui, Z | en_US |
dc.contributor.author | Zhang, X | en_US |
dc.contributor.author | Jiang, J | en_US |
dc.contributor.author | Gu, JD | en_US |
dc.contributor.author | Li, S | en_US |
dc.date.accessioned | 2012-12-19T09:51:01Z | - |
dc.date.available | 2012-12-19T09:51:01Z | - |
dc.date.issued | 2006 | en_US |
dc.identifier.citation | Biodegradation, 2006, v. 17 n. 5, p. 465-472 | en_US |
dc.identifier.issn | 0923-9820 | en_US |
dc.identifier.uri | http://hdl.handle.net/10722/178955 | - |
dc.description.abstract | Seven organophosphorus pesticide-degrading bacteria harboring the methyl parathion degrading (mpd) gene were isolated from a methyl parathion contaminated site. In this study, the 4.7 kb mpd gene cluster, conserved in all seven bacteria capable of degrading methyl parathion, was cloned and further analysis revealed that this cluster contained five ORFs and the mpd gene was associated with a mobile element, IS6100. In addition to mpd gene ORF and tnpA ORF, three other ORFs showed high homology to the permease component of ABC-type transport system, the general secretion pathway protein B, and the RNA polymerase sigma 70 factor, respectively. The mpd genes of these 7 strains were subcloned and expressed in E. coli, SDS-PAGE and zymogram analysis showed that two expression products of mpd genes in E. coli were found, but the one without signal peptide showed the hydrolytic activities. Our evidences collectively suggest that mpd gene cluster may be disseminated through horizontal gene transfer based on phylogenetic analysis of the cluster and their host bacterial strains, and comparisons of GC content of the cluster and respective host's chromosome. © Springer 2006. | en_US |
dc.language | eng | en_US |
dc.publisher | Springer Verlag Dordrecht. The Journal's web site is located at http://springerlink.metapress.com/openurl.asp?genre=journal&issn=0923-9820 | en_US |
dc.relation.ispartof | Biodegradation | en_US |
dc.subject | Degradation | - |
dc.subject | Horizontal gene transfer | - |
dc.subject | Organophosphorus hydrolase gene cluster | - |
dc.subject | Signal peptide | - |
dc.subject.mesh | Aryldialkylphosphatase - Genetics | en_US |
dc.subject.mesh | Biodegradation, Environmental | en_US |
dc.subject.mesh | Cloning, Molecular | en_US |
dc.subject.mesh | Environmental Pollution | en_US |
dc.subject.mesh | Escherichia Coli - Genetics | en_US |
dc.subject.mesh | Gene Transfer, Horizontal | en_US |
dc.subject.mesh | Genes, Bacterial | en_US |
dc.subject.mesh | Gram-Negative Aerobic Rods And Cocci - Enzymology - Genetics - Isolation & Purification | en_US |
dc.subject.mesh | Methyl Parathion - Metabolism | en_US |
dc.subject.mesh | Multigene Family | en_US |
dc.subject.mesh | Open Reading Frames | en_US |
dc.subject.mesh | Pesticides - Metabolism | en_US |
dc.title | Cloning of the organophosphorus pesticide hydrolase gene clusters of seven degradative bacteria isolated from a methyl parathion contaminated site and evidence of their horizontal gene transfer | en_US |
dc.type | Article | en_US |
dc.identifier.email | Gu, JD: jdgu@hkucc.hku.hk | en_US |
dc.identifier.authority | Gu, JD=rp00701 | en_US |
dc.description.nature | link_to_subscribed_fulltext | en_US |
dc.identifier.doi | 10.1007/s10532-005-9018-6 | en_US |
dc.identifier.pmid | 16477356 | - |
dc.identifier.scopus | eid_2-s2.0-33748657366 | en_US |
dc.identifier.hkuros | 134260 | - |
dc.relation.references | http://www.scopus.com/mlt/select.url?eid=2-s2.0-33748657366&selection=ref&src=s&origin=recordpage | en_US |
dc.identifier.volume | 17 | en_US |
dc.identifier.issue | 5 | en_US |
dc.identifier.spage | 465 | en_US |
dc.identifier.epage | 472 | en_US |
dc.identifier.isi | WOS:000240395700008 | - |
dc.publisher.place | Netherlands | en_US |
dc.identifier.scopusauthorid | Zhang, R=8612262700 | en_US |
dc.identifier.scopusauthorid | Cui, Z=8678239700 | en_US |
dc.identifier.scopusauthorid | Zhang, X=11639083000 | en_US |
dc.identifier.scopusauthorid | Jiang, J=35240365600 | en_US |
dc.identifier.scopusauthorid | Gu, JD=7403129601 | en_US |
dc.identifier.scopusauthorid | Li, S=24587265400 | en_US |
dc.identifier.issnl | 0923-9820 | - |