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- Publisher Website: 10.1136/jmg.2004.020396
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- PMID: 15466007
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Article: A genome-wide linkage scan for bone mineral density in an extended sample: Evidence for linkage on 11q23 and Xq27
Title | A genome-wide linkage scan for bone mineral density in an extended sample: Evidence for linkage on 11q23 and Xq27 |
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Authors | |
Issue Date | 2004 |
Publisher | BMJ Group. The Journal's web site is located at http://jmg.bmj.com/ |
Citation | Journal Of Medical Genetics, 2004, v. 41 n. 10, p. 743-751 How to Cite? |
Abstract | Background: Osteoporosis is a major public health problem, mainly quantified by low bone mineral density (BMD). The majority of BMD variation is determined by genetic effects. A pilot whole genome linkage scan (WGS) was previously reported in 53 white pedigrees with 630 subjects. Several genomic regions were suggested to be linked to BMD variation. Objective: To substantiate these previous findings and detect new genomic regions. Methods: A WGS was conducted on an extended sample where the size was almost tripled (1816 subjects from 79 pedigrees). All the subjects were genotyped with 451 microsatellite markers spaced ∼8.1 cM apart across the human genome. Two point and multipoint linkage analyses were carried out using the variance component method. Results: The strongest linkage signal was obtained on Xq27 with two point LOD scores of 4.30 for wrist BMD, and 2.57 for hip BMD, respectively. Another important region was 11q23, which achieved a maximum LOD score of 3.13 for spine BMD in multipoint analyses, confirming the results on this region in two earlier independent studies. Suggestive linkage evidence was also found on 7p14 and 20p12. Conclusions: Together with the findings from other studies, the current study has further delineated the genetic basis of bone mass and highlights the importance of increasing sample size to confirm linkage findings and to identify new regions of linkage. |
Persistent Identifier | http://hdl.handle.net/10722/179123 |
ISSN | 2023 Impact Factor: 3.5 2023 SCImago Journal Rankings: 1.690 |
ISI Accession Number ID | |
References |
DC Field | Value | Language |
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dc.contributor.author | Shen, H | en_US |
dc.contributor.author | Zhang, YY | en_US |
dc.contributor.author | Long, JR | en_US |
dc.contributor.author | Xu, FH | en_US |
dc.contributor.author | Liu, YZ | en_US |
dc.contributor.author | Xiao, P | en_US |
dc.contributor.author | Zhao, LJ | en_US |
dc.contributor.author | Xiong, DH | en_US |
dc.contributor.author | Liu, YJ | en_US |
dc.contributor.author | Dvornyk, V | en_US |
dc.contributor.author | RochaSanchez, S | en_US |
dc.contributor.author | Liu, PY | en_US |
dc.contributor.author | Li, JL | en_US |
dc.contributor.author | Conway, T | en_US |
dc.contributor.author | Davies, KM | en_US |
dc.contributor.author | Recker, RR | en_US |
dc.contributor.author | Deng, HW | en_US |
dc.date.accessioned | 2012-12-19T09:52:09Z | - |
dc.date.available | 2012-12-19T09:52:09Z | - |
dc.date.issued | 2004 | en_US |
dc.identifier.citation | Journal Of Medical Genetics, 2004, v. 41 n. 10, p. 743-751 | en_US |
dc.identifier.issn | 0022-2593 | en_US |
dc.identifier.uri | http://hdl.handle.net/10722/179123 | - |
dc.description.abstract | Background: Osteoporosis is a major public health problem, mainly quantified by low bone mineral density (BMD). The majority of BMD variation is determined by genetic effects. A pilot whole genome linkage scan (WGS) was previously reported in 53 white pedigrees with 630 subjects. Several genomic regions were suggested to be linked to BMD variation. Objective: To substantiate these previous findings and detect new genomic regions. Methods: A WGS was conducted on an extended sample where the size was almost tripled (1816 subjects from 79 pedigrees). All the subjects were genotyped with 451 microsatellite markers spaced ∼8.1 cM apart across the human genome. Two point and multipoint linkage analyses were carried out using the variance component method. Results: The strongest linkage signal was obtained on Xq27 with two point LOD scores of 4.30 for wrist BMD, and 2.57 for hip BMD, respectively. Another important region was 11q23, which achieved a maximum LOD score of 3.13 for spine BMD in multipoint analyses, confirming the results on this region in two earlier independent studies. Suggestive linkage evidence was also found on 7p14 and 20p12. Conclusions: Together with the findings from other studies, the current study has further delineated the genetic basis of bone mass and highlights the importance of increasing sample size to confirm linkage findings and to identify new regions of linkage. | en_US |
dc.language | eng | en_US |
dc.publisher | BMJ Group. The Journal's web site is located at http://jmg.bmj.com/ | en_US |
dc.relation.ispartof | Journal of Medical Genetics | en_US |
dc.subject.mesh | Bone Density - Genetics | en_US |
dc.subject.mesh | Chromosomes, Human, Pair 11 - Genetics | en_US |
dc.subject.mesh | Chromosomes, Human, X - Genetics | en_US |
dc.subject.mesh | Female | en_US |
dc.subject.mesh | Genetic Linkage - Genetics | en_US |
dc.subject.mesh | Genome, Human | en_US |
dc.subject.mesh | Genomics | en_US |
dc.subject.mesh | Genotype | en_US |
dc.subject.mesh | Humans | en_US |
dc.subject.mesh | Lod Score | en_US |
dc.subject.mesh | Male | en_US |
dc.subject.mesh | Middle Aged | en_US |
dc.subject.mesh | Pedigree | en_US |
dc.title | A genome-wide linkage scan for bone mineral density in an extended sample: Evidence for linkage on 11q23 and Xq27 | en_US |
dc.type | Article | en_US |
dc.identifier.email | Dvornyk, V: dvornyk@hku.hk | en_US |
dc.identifier.authority | Dvornyk, V=rp00693 | en_US |
dc.description.nature | link_to_subscribed_fulltext | en_US |
dc.identifier.doi | 10.1136/jmg.2004.020396 | en_US |
dc.identifier.pmid | 15466007 | - |
dc.identifier.scopus | eid_2-s2.0-6344265517 | en_US |
dc.relation.references | http://www.scopus.com/mlt/select.url?eid=2-s2.0-6344265517&selection=ref&src=s&origin=recordpage | en_US |
dc.identifier.volume | 41 | en_US |
dc.identifier.issue | 10 | en_US |
dc.identifier.spage | 743 | en_US |
dc.identifier.epage | 751 | en_US |
dc.identifier.isi | WOS:000224230500004 | - |
dc.publisher.place | United Kingdom | en_US |
dc.identifier.scopusauthorid | Shen, H=36126870600 | en_US |
dc.identifier.scopusauthorid | Zhang, YY=12781205700 | en_US |
dc.identifier.scopusauthorid | Long, JR=7403446542 | en_US |
dc.identifier.scopusauthorid | Xu, FH=7401695313 | en_US |
dc.identifier.scopusauthorid | Liu, YZ=7410227746 | en_US |
dc.identifier.scopusauthorid | Xiao, P=34573749200 | en_US |
dc.identifier.scopusauthorid | Zhao, LJ=7404455505 | en_US |
dc.identifier.scopusauthorid | Xiong, DH=7007033697 | en_US |
dc.identifier.scopusauthorid | Liu, YJ=36065513000 | en_US |
dc.identifier.scopusauthorid | Dvornyk, V=6701789786 | en_US |
dc.identifier.scopusauthorid | RochaSanchez, S=6508079951 | en_US |
dc.identifier.scopusauthorid | Liu, PY=7404618030 | en_US |
dc.identifier.scopusauthorid | Li, JL=7410075530 | en_US |
dc.identifier.scopusauthorid | Conway, T=7101933762 | en_US |
dc.identifier.scopusauthorid | Davies, KM=8094376800 | en_US |
dc.identifier.scopusauthorid | Recker, RR=7007086875 | en_US |
dc.identifier.scopusauthorid | Deng, HW=34568563000 | en_US |
dc.identifier.issnl | 0022-2593 | - |