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Article: Hologenome analysis of two marine sponges with different microbiomes

TitleHologenome analysis of two marine sponges with different microbiomes
Authors
Ryu, TaewooSeridi, LoqmaneMoitinho-Silva, LucasOates, MatthewLiew, Yi JinMavromatis, CharalamposWang, XiaoleiHaywood, AnnikaLafi, Feras F.Kupresanin, MarijaSougrat, RachidAlzahrani, Majed A.Giles, EmilyGhosheh, YanalSchunter, CeliaBaumgarten, SebastianBerumen, Michael L.Gao, XinAranda, ManuelForet, SylvainGough, JulianVoolstra, Christian R.Hentschel, UteRavasi, Timothy
KeywordsMicrobial symbionts
Host
Xestospongia testudinaria
Stylissa carteri
Sponge
Innate immune system
Hologenome
Issue Date2016
Citation
BMC Genomics, 2016, v. 17, n. 1, article no. 158 How to Cite?
DOI: http://dx.doi.org/10.1186/s12864-016-2501-0
Abstract© 2016 Ryu et al. Background: Sponges (Porifera) harbor distinct microbial consortia within their mesohyl interior. We herein analysed the hologenomes of Stylissa carteri and Xestospongia testudinaria, which notably differ in their microbiome content. Results: Our analysis revealed that S. carteri has an expanded repertoire of immunological domains, specifically Scavenger Receptor Cysteine-Rich (SRCR)-like domains, compared to X. testudinaria. On the microbial side, metatranscriptome analyses revealed an overrepresentation of potential symbiosis-related domains in X. testudinaria. Conclusions: Our findings provide genomic insights into the molecular mechanisms underlying host-symbiont coevolution and may serve as a roadmap for future hologenome analyses.
Persistent Identifierhttp://hdl.handle.net/10722/264975
ISI Accession Number ID
WOS:000371594300009

 

DC FieldValueLanguage
dc.contributor.authorRyu, Taewoo-
dc.contributor.authorSeridi, Loqmane-
dc.contributor.authorMoitinho-Silva, Lucas-
dc.contributor.authorOates, Matthew-
dc.contributor.authorLiew, Yi Jin-
dc.contributor.authorMavromatis, Charalampos-
dc.contributor.authorWang, Xiaolei-
dc.contributor.authorHaywood, Annika-
dc.contributor.authorLafi, Feras F.-
dc.contributor.authorKupresanin, Marija-
dc.contributor.authorSougrat, Rachid-
dc.contributor.authorAlzahrani, Majed A.-
dc.contributor.authorGiles, Emily-
dc.contributor.authorGhosheh, Yanal-
dc.contributor.authorSchunter, Celia-
dc.contributor.authorBaumgarten, Sebastian-
dc.contributor.authorBerumen, Michael L.-
dc.contributor.authorGao, Xin-
dc.contributor.authorAranda, Manuel-
dc.contributor.authorForet, Sylvain-
dc.contributor.authorGough, Julian-
dc.contributor.authorVoolstra, Christian R.-
dc.contributor.authorHentschel, Ute-
dc.contributor.authorRavasi, Timothy-
dc.date.accessioned2018-11-08T01:35:28Z-
dc.date.available2018-11-08T01:35:28Z-
dc.date.issued2016-
dc.identifier.citationBMC Genomics, 2016, v. 17, n. 1, article no. 158-
dc.identifier.urihttp://hdl.handle.net/10722/264975-
dc.description.abstract© 2016 Ryu et al. Background: Sponges (Porifera) harbor distinct microbial consortia within their mesohyl interior. We herein analysed the hologenomes of Stylissa carteri and Xestospongia testudinaria, which notably differ in their microbiome content. Results: Our analysis revealed that S. carteri has an expanded repertoire of immunological domains, specifically Scavenger Receptor Cysteine-Rich (SRCR)-like domains, compared to X. testudinaria. On the microbial side, metatranscriptome analyses revealed an overrepresentation of potential symbiosis-related domains in X. testudinaria. Conclusions: Our findings provide genomic insights into the molecular mechanisms underlying host-symbiont coevolution and may serve as a roadmap for future hologenome analyses.-
dc.languageeng-
dc.relation.ispartofBMC Genomics-
dc.rightsThis work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License.-
dc.subjectMicrobial symbionts-
dc.subjectHost-
dc.subjectXestospongia testudinaria-
dc.subjectStylissa carteri-
dc.subjectSponge-
dc.subjectInnate immune system-
dc.subjectHologenome-
dc.titleHologenome analysis of two marine sponges with different microbiomes-
dc.typeArticle-
dc.description.naturepublished_or_final_version-
dc.identifier.doi10.1186/s12864-016-2501-0-
dc.identifier.pmid26926518-
dc.identifier.scopuseid_2-s2.0-84978763678-
dc.identifier.hkuros301980-
dc.identifier.volume17-
dc.identifier.issue1-
dc.identifier.spagearticle no. 158-
dc.identifier.epagearticle no. 158-
dc.identifier.eissn1471-2164-
dc.identifier.isiWOS:000371594300009-
dc.identifier.issnl1471-2164-

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