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Article: Accelerating multipool CEST MRI of Parkinson's disease using deep learning–based Z-spectral compressed sensing

TitleAccelerating multipool CEST MRI of Parkinson's disease using deep learning–based Z-spectral compressed sensing
Authors
Keywords1D U-net
chemical exchange saturation transfer (CEST)
compressed sensing (CS)
deep learning
MRI
Parkinson's disease (PD)
Issue Date1-Jan-2024
PublisherWiley
Citation
Magnetic Resonance in Medicine, 2024, v. 92, n. 6, p. 2616-2630 How to Cite?
AbstractPurpose: To develop a deep learning–based approach to reduce the scan time of multipool CEST MRI for Parkinson's disease (PD) while maintaining sufficient prediction accuracy. Method: A deep learning approach based on a modified one-dimensional U-Net, termed Z-spectral compressed sensing (CS), was proposed to recover dense Z-spectra from sparse ones. The neural network was trained using simulated Z-spectra generated by the Bloch equation with various parameter settings. Its feasibility and effectiveness were validated through numerical simulations and in vivo rat brain experiments, compared with commonly used linear, pchip, and Lorentzian interpolation methods. The proposed method was applied to detect metabolism-related changes in the 6-hydroxydopamine PD model with multipool CEST MRI, including APT, CEST@2 ppm, nuclear Overhauser enhancement, direct saturation, and magnetization transfer, and the prediction performance was evaluated by area under the curve. Results: The numerical simulations and in vivo rat-brain experiments demonstrated that the proposed method could yield superior fidelity in retrieving dense Z-spectra compared with existing methods. Significant differences were observed in APT, CEST@2 ppm, nuclear Overhauser enhancement, and direct saturation between the striatum regions of wild-type and PD models, whereas magnetization transfer exhibited no significant difference. Receiver operating characteristic analysis demonstrated that multipool CEST achieved better predictive performance compared with individual pools. Combined with Z-spectral CS, the scan time of multipool CEST MRI can be reduced to 33% without distinctly compromising prediction accuracy. Conclusion: The integration of Z-spectral CS with multipool CEST MRI can enhance the prediction accuracy of PD and maintain the scan time within a reasonable range.
Persistent Identifierhttp://hdl.handle.net/10722/348691
ISSN
2023 Impact Factor: 3.0
2023 SCImago Journal Rankings: 1.343

 

DC FieldValueLanguage
dc.contributor.authorChen, Lin-
dc.contributor.authorXu, Haipeng-
dc.contributor.authorGong, Tao-
dc.contributor.authorJin, Junxian-
dc.contributor.authorLin, Liangjie-
dc.contributor.authorZhou, Yang-
dc.contributor.authorHuang, Jianpan-
dc.contributor.authorChen, Zhong-
dc.date.accessioned2024-10-13T00:30:09Z-
dc.date.available2024-10-13T00:30:09Z-
dc.date.issued2024-01-01-
dc.identifier.citationMagnetic Resonance in Medicine, 2024, v. 92, n. 6, p. 2616-2630-
dc.identifier.issn0740-3194-
dc.identifier.urihttp://hdl.handle.net/10722/348691-
dc.description.abstractPurpose: To develop a deep learning–based approach to reduce the scan time of multipool CEST MRI for Parkinson's disease (PD) while maintaining sufficient prediction accuracy. Method: A deep learning approach based on a modified one-dimensional U-Net, termed Z-spectral compressed sensing (CS), was proposed to recover dense Z-spectra from sparse ones. The neural network was trained using simulated Z-spectra generated by the Bloch equation with various parameter settings. Its feasibility and effectiveness were validated through numerical simulations and in vivo rat brain experiments, compared with commonly used linear, pchip, and Lorentzian interpolation methods. The proposed method was applied to detect metabolism-related changes in the 6-hydroxydopamine PD model with multipool CEST MRI, including APT, CEST@2 ppm, nuclear Overhauser enhancement, direct saturation, and magnetization transfer, and the prediction performance was evaluated by area under the curve. Results: The numerical simulations and in vivo rat-brain experiments demonstrated that the proposed method could yield superior fidelity in retrieving dense Z-spectra compared with existing methods. Significant differences were observed in APT, CEST@2 ppm, nuclear Overhauser enhancement, and direct saturation between the striatum regions of wild-type and PD models, whereas magnetization transfer exhibited no significant difference. Receiver operating characteristic analysis demonstrated that multipool CEST achieved better predictive performance compared with individual pools. Combined with Z-spectral CS, the scan time of multipool CEST MRI can be reduced to 33% without distinctly compromising prediction accuracy. Conclusion: The integration of Z-spectral CS with multipool CEST MRI can enhance the prediction accuracy of PD and maintain the scan time within a reasonable range.-
dc.languageeng-
dc.publisherWiley-
dc.relation.ispartofMagnetic Resonance in Medicine-
dc.rightsThis work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License.-
dc.subject1D U-net-
dc.subjectchemical exchange saturation transfer (CEST)-
dc.subjectcompressed sensing (CS)-
dc.subjectdeep learning-
dc.subjectMRI-
dc.subjectParkinson's disease (PD)-
dc.titleAccelerating multipool CEST MRI of Parkinson's disease using deep learning–based Z-spectral compressed sensing-
dc.typeArticle-
dc.identifier.doi10.1002/mrm.30233-
dc.identifier.pmid39044635-
dc.identifier.scopuseid_2-s2.0-85199322871-
dc.identifier.volume92-
dc.identifier.issue6-
dc.identifier.spage2616-
dc.identifier.epage2630-
dc.identifier.eissn1522-2594-
dc.identifier.issnl0740-3194-

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