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Article: Comparative mitogenomic and phylogenetic characterization on the complete mitogenomes of Talaromyces (Penicillium) marneffei

TitleComparative mitogenomic and phylogenetic characterization on the complete mitogenomes of Talaromyces (Penicillium) marneffei
Authors
Tam, WTTsang, CCLau, SKPWoo, PCY
KeywordsMitogenome
Talaromyces marneffei
Penicillium marneffei
Phylogeny
Comparative genomics
Issue Date2017
PublisherTaylor & Francis. The Journal's web site is located at http://www.tandfonline.com/toc/tmdn20/current
Citation
Mitochondrial DNA Part B, 2017, v. 1 n. 1, p. 941-942 How to Cite?
DOI: http://dx.doi.org/10.1080/23802359.2016.1261610
AbstractWe report the complete mitochondrial DNA (mtDNA) sequences of four Talaromyces marneffei strains and performed comparative genomic and phylogenetic analyses. The gene orders of the four mtDNAs are identical to the previously published mtDNA of strain PM1 (nad4l, nad5, nad2, atp9, cob, nad1, nad4, atp8, atp6, nad6, cox3, rps, cox1, nad3, cox2). Phylogenetic analysis showed that the four mtDNAs were clustered with that of PM1 with high bootstrap support. Compared to mtDNA of PM1, the only non-synonymous mutation was located in nad2 (T505M) of strain PM26. Synonymous single nucleotide polymorphisms were observed at eight positions in the four mtDNAs.
Persistent Identifierhttp://hdl.handle.net/10722/258657
ISSN
2380-2359
2021 Impact Factor: 0.610
2020 SCImago Journal Rankings: 0.262
ISI Accession Number ID
WOS:000402041200419

 

DC FieldValueLanguage
dc.contributor.authorTam, WT-
dc.contributor.authorTsang, CC-
dc.contributor.authorLau, SKP-
dc.contributor.authorWoo, PCY-
dc.date.accessioned2018-08-22T01:41:57Z-
dc.date.available2018-08-22T01:41:57Z-
dc.date.issued2017-
dc.identifier.citationMitochondrial DNA Part B, 2017, v. 1 n. 1, p. 941-942-
dc.identifier.issn2380-2359-
dc.identifier.urihttp://hdl.handle.net/10722/258657-
dc.description.abstractWe report the complete mitochondrial DNA (mtDNA) sequences of four Talaromyces marneffei strains and performed comparative genomic and phylogenetic analyses. The gene orders of the four mtDNAs are identical to the previously published mtDNA of strain PM1 (nad4l, nad5, nad2, atp9, cob, nad1, nad4, atp8, atp6, nad6, cox3, rps, cox1, nad3, cox2). Phylogenetic analysis showed that the four mtDNAs were clustered with that of PM1 with high bootstrap support. Compared to mtDNA of PM1, the only non-synonymous mutation was located in nad2 (T505M) of strain PM26. Synonymous single nucleotide polymorphisms were observed at eight positions in the four mtDNAs.-
dc.languageeng-
dc.publisherTaylor & Francis. The Journal's web site is located at http://www.tandfonline.com/toc/tmdn20/current-
dc.relation.ispartofMitochondrial DNA Part B-
dc.rightsThis work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License.-
dc.subjectMitogenome-
dc.subjectTalaromyces marneffei-
dc.subjectPenicillium marneffei-
dc.subjectPhylogeny-
dc.subjectComparative genomics-
dc.titleComparative mitogenomic and phylogenetic characterization on the complete mitogenomes of Talaromyces (Penicillium) marneffei-
dc.typeArticle-
dc.identifier.emailTsang, CC: microbioct@connect.hku.hk-
dc.identifier.emailLau, SKP: skplau@hkucc.hku.hk-
dc.identifier.emailWoo, PCY: pcywoo@hkucc.hku.hk-
dc.identifier.authorityTsang, CC=rp02492-
dc.identifier.authorityLau, SKP=rp00486-
dc.identifier.authorityWoo, PCY=rp00430-
dc.description.naturepublished_or_final_version-
dc.identifier.doi10.1080/23802359.2016.1261610-
dc.identifier.scopuseid_2-s2.0-85020924122-
dc.identifier.hkuros287283-
dc.identifier.hkuros271033-
dc.identifier.volume1-
dc.identifier.issue1-
dc.identifier.spage941-
dc.identifier.epage942-
dc.identifier.isiWOS:000402041200419-
dc.publisher.placeUnited Kingdom-
dc.identifier.issnl2380-2359-

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